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publication / 2020
In vivo X-ray diffraction and simultaneous EMG reveal the time course of myofilament lattice dilation and filament stretch
Journal of Experimental Biology
Cell Science

S. Malingen, A. Asencio, J. Cass, Weikang Ma, T. Irving, T. Daniel

publication / 2020
Projection-specific Activity of Layer 2/3 Neurons Imaged in Mouse Primary Somatosensory Barrel Cortex During a Whisker Detection Task
Function (Oxford, England)
Brain Science
MindScope

Angeliki Vavladeli, Tanya Daigle, Hongkui Zeng, Sylvain Crochet, Carl C. H. Petersen

publication / 2020
Separation of hemodynamic signals from GCaMP fluorescence measured with wide-field imaging
Journal of Neurophysiology
Brain Science
MindScope

M. T. Valley, M. G. Moore, J. Zhuang, N. Mesa, D. Castelli, D. Sullivan, M. Reimers, J. Waters

publication / 2019
Individual structural features constrain the mouse functional connectome
Proceedings of the National Academy of Sciences of the United States of America
Brain Science
MindScope

Francesca Melozzi, Eyal Bergmann, Julie A. Harris, Itamar Kahn, Viktor Jirsa, Christophe Bernard

publication / 2019
Sex-Based Analysis of De Novo Variants in Neurodevelopmental Disorders
American Journal of Human Genetics
Brain Science
MindScope

Tychele N. Turner, Amy B. Wilfert, Trygve E. Bakken, Raphael A. Bernier, Micah R. Pepper, Zhancheng Zhang, Rebecca I. Torene, Kyle Retterer, Evan E. Eichler

publication / 2019
Progress update from the hippocampal subfields group
Alzheimer's & Dementia (Amsterdam, Netherlands)
Brain Science
MindScope

Rosanna K. Olsen, Valerie A. Carr, Ana M. Daugherty, Renaud La Joie, Robert S. C. Amaral, Katrin Amunts, Jean C. Augustinack, Arnold Bakker, Andrew R. Bender, David Berron, Marina Boccardi, Martina Bocchetta, Alison C. Burggren, M. Mallar Chakravarty, Gaël Chételat, Robin de Flores, Jordan DeKraker, Song-Lin Ding, Mirjam I. Geerlings, Yushan Huang, Ricardo Insausti, Elliott G. Johnson, Prabesh Kanel, Olga Kedo, Kristen M. Kennedy, Attila Keresztes, Joshua K. Lee, Ulman Lindenberger, Susanne G. Mueller, Elizabeth M. Mulligan, Noa Ofen, Daniela J. Palombo, Lorenzo Pasquini, John Pluta, Naftali Raz, Karen M. Rodrigue, Margaret L. Schlichting, Yee Lee Shing, Craig E. L. Stark, Trevor A. Steve, Nanthia A. Suthana, Lei Wang, Markus Werkle-Bergner, Paul A. Yushkevich, Qijing Yu, Laura E. M. Wisse, Hippocampal Subfields Group

publication / 2019
Visual Cortex Gains Independence from Peripheral Drive before Eye Opening
Neuron
Brain Science
MindScope

Alexandra Gribizis, Xinxin Ge, Tanya L. Daigle, James B. Ackman, Hongkui Zeng, Daeyeol Lee, Michael C. Crair

publication / 2019
Genetic Identification of Vagal Sensory Neurons That Control Feeding
Cell
Brain Science
MindScope

Ling Bai, Sheyda Mesgarzadeh, Karthik S. Ramesh, Erica L. Huey, Yin Liu, Lindsay A. Gray, Tara J. Aitken, Yiming Chen, Lisa R. Beutler, Jamie S. Ahn, Linda Madisen, Hongkui Zeng, Mark A. Krasnow, Zachary A. Knight

publication / 2019
Wide. Fast. Deep: Recent Advances in Multiphoton Microscopy of In Vivo Neuronal Activity
The Journal of Neuroscience: The Official Journal of the Society for Neuroscience
Brain Science
MindScope

Jérôme Lecoq, Natalia Orlova, Benjamin F. Grewe

publication / 2019
Single-cell transcriptomic evidence for dense intracortical neuropeptide networks
eLife
Brain Science
MindScope

Stephen J. Smith, Uygar Sümbül, Lucas T. Graybuck, Forrest Collman, Sharmishtaa Seshamani, Rohan Gala, Olga Gliko, Leila Elabbady, Jeremy A. Miller, Trygve E. Bakken, Jean Rossier, Zizhen Yao, Ed Lein, Hongkui Zeng, Bosiljka Tasic, Michael Hawrylycz

publication / 2019
DLITE Uses Cell-Cell Interface Movement to Better Infer Cell-Cell Tensions
Biophysical Journal
Cell Science

Ritvik Vasan, Mary M. Maleckar, C. David Williams, Padmini Rangamani

publication / 2019
Dual-plane 3-photon microscopy with remote focusing
Biomedical Optics Express
Brain Science
MindScope

Kevin T. Takasaki, Dmitri Tsyboulski, Jack Waters

publication / 2019
Hierarchical organization of cortical and thalamic connectivity
Nature
Brain Science
MindScope

Julie A. Harris, Stefan Mihalas, Karla E. Hirokawa, Jennifer D. Whitesell, Hannah Choi, Amy Bernard, Phillip Bohn, Shiella Caldejon, Linzy Casal, Andrew Cho, Aaron Feiner, David Feng, Nathalie Gaudreault, Charles R. Gerfen, Nile Graddis, Peter A. Groblewski, Alex M. Henry, Anh Ho, Robert Howard, Joseph E. Knox, Leonard Kuan, Xiuli Kuang, Jerome Lecoq, Phil Lesnar, Yaoyao Li, Jennifer Luviano, Stephen McConoughey, Marty T. Mortrud, Maitham Naeemi, Lydia Ng, Seung Wook Oh, Benjamin Ouellette, Elise Shen, Staci A. Sorensen, Wayne Wakeman, Quanxin Wang, Yun Wang, Ali Williford, John W. Phillips, Allan R. Jones, Christof Koch, Hongkui Zeng

publication / 2019
Kilohertz two-photon brain imaging in awake mice
Nature Methods
Brain Science
MindScope

Tong Zhang, Oscar Hernandez, Radosław Chrapkiewicz, Adam Shai, Mark J. Wagner, Yanping Zhang, Cheng-Hsun Wu, Jin Zhong Li, Masatoshi Inoue, Yiyang Gong, Biafra Ahanonu, Hongkui Zeng, Haruhiko Bito, Mark J. Schnitzer

publication / 2019
Definitions, methods, and applications in interpretable machine learning
Proceedings of the National Academy of Sciences of the United States of America
Brain Science
MindScope

W. James Murdoch, Chandan Singh, Karl Kumbier, Reza Abbasi-Asl, Bin Yu

publication / 2019
A perspective on Microscopy Metadata: data provenance and quality control
Cell Science

Maximiliaan Huisman, Mathias Hammer, Alex Rigano, Ulrike Boehm, James J. Chambers, Nathalie Gaudreault, Alison J. North, Jaime A. Pimentel, Damir Sudar, Peter Bajcsy, Claire M. Brown, Alexander D. Corbett, Orestis Faklaris, Judith Lacoste, Alex Laude, Glyn Nelson, Roland Nitschke, David Grunwald, Caterina Strambio-De-Castillia

publication / 2019
Neural precursors of decisions that matter-an ERP study of deliberate and arbitrary choice
eLife
Brain Science
MindScope

Uri Maoz, Gideon Yaffe, Christof Koch, Liad Mudrik

publication / 2019
Multimodal Analysis of Cell Types in a Hypothalamic Node Controlling Social Behavior
Cell
Brain Science
MindScope

Dong-Wook Kim, Zizhen Yao, Lucas T. Graybuck, Tae Kyung Kim, Thuc Nghi Nguyen, Kimberly A. Smith, Olivia Fong, Lynn Yi, Noushin Koulena, Nico Pierson, Sheel Shah, Liching Lo, Allan-Hermann Pool, Yuki Oka, Lior Pachter, Long Cai, Bosiljka Tasic, Hongkui Zeng, David J. Anderson

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