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publication / 2020
A petascale automated imaging pipeline for mapping neuronal circuits with high-throughput transmission electron microscopy
Nature Communications
Brain Science
MindScope

Wenjing Yin, Derrick Brittain, Jay Borseth, Marie E. Scott, Derric Williams, Jedediah Perkins, Christopher S. Own, Matthew Murfitt, Russel M. Torres, Daniel Kapner, Gayathri Mahalingam, Adam Bleckert, Daniel Castelli, David Reid, Wei-Chung Allen Lee, Brett J. Graham, Marc Takeno, Daniel J. Bumbarger, Colin Farrell, R. Clay Reid, Nuno Macarico da Costa

publication / 2020
Hindbrain Double-Negative Feedback Mediates Palatability-Guided Food and Water Consumption
Cell
Brain Science
MindScope

Rong Gong, Shengjin Xu, Ann Hermundstad, Yang Yu, Scott M. Sternson

publication / 2020
The Mind of a Mouse
Cell
Brain Science
MindScope

Larry F. Abbott, Davi D. Bock, Edward M. Callaway, Winfried Denk, Catherine Dulac, Adrienne L. Fairhall, Ila Fiete, Kristen M. Harris, Moritz Helmstaedter, Viren Jain, Narayanan Kasthuri, Yann LeCun, Jeff W. Lichtman, Peter B. Littlewood, Liqun Luo, John H. R. Maunsell, R. Clay Reid, Bruce R. Rosen, Gerald M. Rubin, Terrence J. Sejnowski, H. Sebastian Seung, Karel Svoboda, David W. Tank, Doris Tsao, David C. Van Essen

publication / 2020
Dopamine D1 receptor signalling in dyskinetic Parkinsonian rats revealed by fiber photometry using FRET-based biosensors
Scientific Reports
Neural Dynamics

Jace Jones-Tabah, Hanan Mohammad, Shadi Hadj-Youssef, Lucy E. H. Kim, Ryan D. Martin, Faïza Benaliouad, Jason C. Tanny, Paul B. S. Clarke, Terence E. Hébert

publication / 2020
A second X chromosome contributes to resilience in a mouse model of Alzheimer's disease
Science Translational Medicine
Brain Science
MindScope

Emily J. Davis, Lauren Broestl, Samira Abdulai-Saiku, Kurtresha Worden, Luke W. Bonham, Elena Miñones-Moyano, Arturo J. Moreno, Dan Wang, Kevin Chang, Gina Williams, Bayardo I. Garay, Iryna Lobach, Nino Devidze, Daniel Kim, Cliff Anderson-Bergman, Gui-Qiu Yu, Charles C. White, Julie A. Harris, Bruce L. Miller, David A. Bennett, Arthur P. Arnold, Phil L. De Jager, Jorge J. Palop, Barbara Panning, Jennifer S. Yokoyama, Lennart Mucke, Dena B. Dubal

publication / 2020
An evolutionary driver of interspersed segmental duplications in primates
Genome Biology
Brain Science
MindScope

Stuart Cantsilieris, Susan M. Sunkin, Matthew E. Johnson, Fabio Anaclerio, John Huddleston, Carl Baker, Max L. Dougherty, Jason G. Underwood, Arvis Sulovari, PingHsun Hsieh, Yafei Mao, Claudia Rita Catacchio, Maika Malig, AnneMarie E. Welch, Melanie Sorensen, Katherine M. Munson, Weihong Jiang, Santhosh Girirajan, Mario Ventura, Bruce T. Lamb, Ronald A. Conlon, Evan E. Eichler

publication / 2020
Flexible neural connectivity under constraints on total connection strength
PLoS computational biology
Brain Science
MindScope

Gabriel Koch Ocker, Michael A. Buice

publication / 2020
New light on cortical neuropeptides and synaptic network plasticity
Current Opinion in Neurobiology
Brain Science
MindScope

Stephen J. Smith, Michael Hawrylycz, Jean Rossier, Uygar Sümbül

publication / 2020
Stress and behavioral correlates in the head-fixed method: stress measurements, habituation dynamics, locomotion, and motor-skill learning in mice
Scientific Reports
Neural Dynamics

Konrad Juczewski, Jonathan A. Koussa, Andrew J. Kesner, Jeong O. Lee, David M. Lovinger

publication / 2020
An Ultra-Sensitive Step-Function Opsin for Minimally Invasive Optogenetic Stimulation in Mice and Macaques
Neuron
Brain Science
MindScope

Xin Gong, Diego Mendoza-Halliday, Jonathan T. Ting, Tobias Kaiser, Xuyun Sun, André M. Bastos, Ralf D. Wimmer, Baolin Guo, Qian Chen, Yang Zhou, Maxwell Pruner, Carolyn W.-H. Wu, Demian Park, Karl Deisseroth, Boaz Barak, Edward S. Boyden, Earl K. Miller, Michael M. Halassa, Zhanyan Fu, Guoqiang Bi, Robert Desimone, Guoping Feng

publication / 2020
Network Dynamics Governed by Lyapunov Functions: From Memory to Classification
Trends in Neurosciences
Brain Science
MindScope

Merav Stern, Eric Shea-Brown

publication / 2020
Parallel RNA and DNA analysis after deep sequencing (PRDD-seq) reveals cell type-specific lineage patterns in human brain
Proceedings of the National Academy of Sciences of the United States of America
Brain Science
MindScope

August Yue Huang, Pengpeng Li, Rachel E. Rodin, Sonia N. Kim, Yanmei Dou, Connor J. Kenny, Shyam K. Akula, Rebecca D. Hodge, Trygve E. Bakken, Jeremy A. Miller, Ed S. Lein, Peter J. Park, Eunjung Alice Lee, Christopher A. Walsh

publication / 2020
Characterization of hippocampal subfields using ex vivo MRI and histology data: Lessons for in vivo segmentation
Hippocampus
Brain Science
MindScope

Robin de Flores, David Berron, Song-Lin Ding, Ranjit Ittyerah, John B. Pluta, Long Xie, Daniel H. Adler, John L. Robinson, Theresa Schuck, John Q. Trojanowski, Murray Grossman, Weixia Liu, Stephen Pickup, Sandhitsu R. Das, David A. Wolk, Paul A. Yushkevich, Laura E. M. Wisse

publication / 2020
A collection of genetic mouse lines and related tools for inducible and reversible intersectional mis-expression
Development (Cambridge, England)
Brain Science
MindScope

Elham Ahmadzadeh, N. Sumru Bayin, Xinli Qu, Aditi Singh, Linda Madisen, Daniel Stephen, Hongkui Zeng, Alexandra L. Joyner, Alberto Rosello-Diez

publication / 2020
Whole-Neuron Synaptic Mapping Reveals Spatially Precise Excitatory/Inhibitory Balance Limiting Dendritic and Somatic Spiking
Neuron
Brain Science
MindScope

Daniel Maxim Iascone, Yujie Li, Uygar Sümbül, Michael Doron, Hanbo Chen, Valentine Andreu, Finola Goudy, Heike Blockus, Larry F. Abbott, Idan Segev, Hanchuan Peng, Franck Polleux

publication / 2020
Distinct Transcriptomic Cell Types and Neural Circuits of the Subiculum and Prosubiculum along the Dorsal-Ventral Axis
Cell Reports
Brain Science
MindScope

Song-Lin Ding, Zizhen Yao, Karla E. Hirokawa, Thuc Nghi Nguyen, Lucas T. Graybuck, Olivia Fong, Phillip Bohn, Kiet Ngo, Kimberly A. Smith, Christof Koch, John W. Phillips, Ed S. Lein, Julie A. Harris, Bosiljka Tasic, Hongkui Zeng

publication / 2020
The Allen Mouse Brain Common Coordinate Framework: A 3D Reference Atlas
Cell
Brain Science
MindScope

Quanxin Wang, Song-Lin Ding, Yang Li, Josh Royall, David Feng, Phil Lesnar, Nile Graddis, Maitham Naeemi, Benjamin Facer, Anh Ho, Tim Dolbeare, Brandon Blanchard, Nick Dee, Wayne Wakeman, Karla E. Hirokawa, Aaron Szafer, Susan M. Sunkin, Seung Wook Oh, Amy Bernard, John W. Phillips, Michael Hawrylycz, Christof Koch, Hongkui Zeng, Julie A. Harris, Lydia Ng

publication / 2020
Systematic Integration of Structural and Functional Data into Multi-scale Models of Mouse Primary Visual Cortex
Neuron
Brain Science
MindScope

Yazan N. Billeh, Binghuang Cai, Sergey L. Gratiy, Kael Dai, Ramakrishnan Iyer, Nathan W. Gouwens, Reza Abbasi-Asl, Xiaoxuan Jia, Joshua H. Siegle, Shawn R. Olsen, Christof Koch, Stefan Mihalas, Anton Arkhipov

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