Skip to main content
impact
about
our story
explore our impact
careers and opportunities
join us
open science
sharing science to speed discovery
open science week
celebrating open science
team science
people & teams
discovery is a team effort
allenites
the people who make our work possible
advisors
their input shapes our science
board of directors
they help us fulfill our mission
shanahan foundation fellowship
at the interface of data and neuroscience
next generation leaders
fostering emerging leaders in bioscience
research
overview
our approach
science at the scale of greatest impact
publications
explore our publications
open science
sharing science to speed discovery
science accelerators
brain science
building a blueprint of the brain
cell science
understanding how cells become organs
neural dynamics
revealing the brain’s hidden algorithms
immunology
creating the ultimate immune system reference
synthetic biology
seattle hub for synthetic biology
education
overview
science education
science is for everyone
open science
sharing science speeds discovery
engagement
education resources
real science. real skills.
field trips
experience science where it happens
educator development
empowering educators
news
overview
all news
explore the latest news
podcast
the human stories behind discovery
sign up for our newsletter
stay connected to our science
events
overview
all events
public engagement, workshops, seminars and more
conferences
connect with us
science resources
science resources
allencell.org
allenimmunology.org
allenneuraldynamics.org
brain-bican.org
brain-map.org
microns-explorer.org
impact
back to menu
team science
our story
explore our impact
careers and opportunities
join us
open science
sharing science to speed discovery
open science week
celebrating open science
team science
people & teams
discovery is a team effort
allenites
the people who make our work possible
advisors
their input shapes our science
board of directors
they help us fulfill our mission
shanahan foundation fellowship
at the interface of data and neuroscience
next generation leaders
fostering emerging leaders in bioscience
research
back to menu
overview
our approach
science at the scale of greatest impact
publications
explore our publications
open science
sharing science to speed discovery
science accelerators
brain science
building a blueprint of the brain
cell science
understanding how cells become organs
neural dynamics
revealing the brain’s hidden algorithms
immunology
creating the ultimate immune system reference
synthetic biology
seattle hub for synthetic biology
education
back to menu
overview
science education
science is for everyone
open science
sharing science speeds discovery
engagement
education resources
real science. real skills.
field trips
experience science where it happens
educator development
empowering educators
news
back to menu
overview
all news
explore the latest news
podcast
the human stories behind discovery
newsletter
stay connected to our science
events
back to menu
overview
all events
public engagement, workshops, seminars and more
conferences
connect with us
science resources
back to menu
science resources
allencell.org
allenimmunology.org
allenneuraldynamics.org
brain-bican.org
brain-map.org
microns-explorer.org
search

publications

explore publications from the allen institute

latest publications

2026
2025
2024
2023
2022
2021
2020
2019
2018
2017
2016
2015
2014
2013
2012
2011
2010
2009
2008
2007
2006
2005
2004
Brain and Consciousness
Brain Science
Cell Science
Education
Immunology
Neural Dynamics
Seattle Hub Team
Shanahan Fellowship
Thank you! Your submission has been received!
Oops! Something went wrong while submitting the form.
publication / 2023
Compression strategies for large-scale electrophysiology data
Journal of Neural Engineering
Neural Dynamics
David Feng
Karel Svoboda
publication / 2023
A biologically inspired architecture with switching units can learn to generalize across backgrounds
Neural Networks: The Official Journal of the International Neural Network Society
Brain Science
MindScope
Stefan Mihalas
publication / 2023
Comparative single-cell transcriptomic analysis of primate brains highlights human-specific regulatory evolution
Nature Ecology & Evolution
Brain Science
MindScope
Rebecca Hodge
Ed Lein
Trygve Bakken
publication / 2023
OME-Zarr: a cloud-optimized bioimaging file format with international community support
Histochemistry and Cell Biology
Cell Science
Lucas Pelkmans
Daniel Toloudis
publication / 2023
Saccade-Responsive Visual Cortical Neurons Do Not Exhibit Distinct Visual Response Properties
eNeuro
Brain Science
MindScope
Neural Dynamics
Saskia de Vries
Michael Buice
publication / 2023
All-optical recreation of naturalistic neural activity with a multifunctional transgenic reporter mouse
Cell Reports
Brain Science
MindScope
Bosiljka Tasic
Tanya L. Daigle
Hongkui Zeng
publication / 2023
Neuroscience Needs Network Science
The Journal of Neuroscience: The Official Journal of the Society for Neuroscience
Brain Science
MindScope
Hongkui Zeng
publication / 2023
Ferroptosis of Microglia in Aging Human White Matter Injury
Annals of Neurology
Brain Science
MindScope
Jeremy Miller
C. Dirk Keene
publication / 2023
Transcriptional maintenance of cortical somatostatin interneuron subtype identity during migration
Neuron
Brain Science
MindScope
Jennie Close
publication / 2023
Spatial and temporal organization of the genome: Current state and future aims of the 4D nucleome project
Molecular Cell
Brain Science
MindScope
Cell Science
Jay Shendure
publication / 2023
Emerging roles of oligodendrocyte precursor cells in neural circuit development and remodeling
Trends in Neurosciences
Brain Science
MindScope
JoAnn Buchanan
Nuno Maçarico da Costa
Lucas Cheadle
publication / 2023
Uncovering circuit mechanisms of current sinks and sources with biophysical simulations of primary visual cortex
eLife
Brain Science
MindScope
Brain and Consciousness
Kael Dai
Christof Koch
Anton Arkhipov
publication / 2023
Genes associated with cognitive ability and HAR show overlapping expression patterns in human cortical neuron types
Nature Communications
Brain Science
MindScope
Kimberly Smith
publication / 2023
Robust enhancer-gene regulation identified by single-cell transcriptomes and epigenomes
Cell Genomics
Brain Science
MindScope
Zizhen Yao
Bosiljka Tasic
Hongkui Zeng
publication / 2023
Sharing neurophysiology data from the Allen Brain Observatory
eLife
Brain Science
MindScope
Brain and Consciousness
Christof Koch
Saskia de Vries
Josh Siegle
publication / 2023
Teaching and Training with Open Science: From Classroom Teaching Tool to Professional Development
Neuroscience
Brain Science
Education and Engagement
Kaitlyn Casimo
publication / 2023
Adeno-associated viral vectors for functional intravenous gene transfer throughout the non-human primate brain
Nature Nanotechnology
Brain Science
MindScope
Victoria Omstead
Naz Taskin
Natalie Weed
publication / 2023
When seeing is not believing: application-appropriate validation matters for quantitative bioimage analysis
Nature Methods
Cell Science
This is some text inside of a div block.
Previous
load more publications

No results found, try reducing your search parameters.

we acceleratedevelopcatalyzeimpact

science done differently. shared openly.

explore our accelerators

brain science

Mapping every cell, connection, and circuit in the brain—openly shared with the world.

cell science

Decoding how cells become tissues, then programming that knowledge into powerful new research tools.

neural dynamics

Revealing the brain's hidden algorithms that transform neural activity into real-world behavior.

immunology

Creating the deepest open reference for the healthy human immune system ever built.

synthetic biology

Engineering cells to record their own histories, transforming how we understand disease over time.

research

Big questions, open answers, and science built to be shared.

education

Inspiring the next generation of scientists through open science resources.

impact

Our science is empowering researchers and advancing health worldwide.
advancing science through open, collaborative research
Get the allen institute newsletter
Stay informed on the latest breakthroughs in neuroscience, bioscience, and AI-driven research.
allen institute
impactpeople & teamscareers & opportunitiesalumnihistory & founder
science resources
allencell.orgallenimmunology.orgallenneuraldynamics.orgbrain-bican.orgbrain-map.orgmicrons-explorer.org
research
brain sciencecell scienceneural dynamicsimmunologysynthetic biologypublications
education
science educationfield tripsprofessional developmenteducation resources
quick links
newseventsopen sciencepodcastscience resourceshuman brain donationvisit uscontact
follow us/

allen institute, 615 Westlake Ave North, Seattle, WA 98109 +12065487055

© 0000 allen institute. all rights reserved.
privacy policyterms of usecitation policyemployee portalpolicy & compliancecookie settings