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publication / 2013
Conserved molecular signatures of neurogenesis in the hippocampal subgranular zone of rodents and primates
Development (Cambridge, England)
Brain Science
MindScope

Jeremy A. Miller, Jason Nathanson, Daniel Franjic, Sungbo Shim, Rachel A. Dalley, Sheila Shapouri, Kimberly A. Smith, Susan M. Sunkin, Amy Bernard, Jeffrey L. Bennett, Chang-Kyu Lee, Michael J. Hawrylycz, Allan R. Jones, David G. Amaral, Nenad Šestan, Fred H. Gage, Ed S. Lein

publication / 2013
Automated image computing reshapes computational neuroscience
BMC bioinformatics
Brain Science
MindScope

Hanchuan Peng, Badrinath Roysam, Giorgio A. Ascoli

publication / 2013
The influence of synaptic weight distribution on neuronal population dynamics
PLoS computational biology
Brain Science
MindScope

Ramakrishnan Iyer, Vilas Menon, Michael Buice, Christof Koch, Stefan Mihalas

publication / 2013
Locally Contractive Dynamics in Generalized Integrate-and-Fire Neurons
SIAM journal on applied dynamical systems
Brain Science
MindScope

Nicolas D. Jimenez, Stefan Mihalas, Richard Brown, Ernst Niebur, Jonathan Rubin

publication / 2013
Genetic approaches to neural circuits in the mouse
Annual Review of Neuroscience
Brain Science
MindScope

Z. Josh Huang, Hongkui Zeng

publication / 2013
Olfactory cortical neurons read out a relative time code in the olfactory bulb
Nature Neuroscience
Brain Science
MindScope

Rafi Haddad, Anne Lanjuin, Linda Madisen, Hongkui Zeng, Venkatesh N. Murthy, Naoshige Uchida

publication / 2013
In vitro human corticogenesis
Neuron
Brain Science
MindScope

Yanling Wang, Ricardo Dolmetsch

publication / 2013
Allen Brain Atlas: an integrated spatio-temporal portal for exploring the central nervous system
Nucleic Acids Research
Brain Science
MindScope

Susan M. Sunkin, Lydia Ng, Chris Lau, Tim Dolbeare, Terri L. Gilbert, Carol L. Thompson, Michael Hawrylycz, Chinh Dang

publication / 2013
Generalized activity equations for spiking neural network dynamics
Frontiers in Computational Neuroscience
Brain Science
MindScope

Michael A. Buice, Carson C. Chow

publication / 2013
The Open Connectome Project Data Cluster: Scalable Analysis and Vision for High-Throughput Neuroscience
Scientific and statistical database management: International Conference, SSDBM ...: proceedings. International Conference on Scientific and Statistical Database Management
Brain Science
MindScope

Randal Burns, William Gray Roncal, Dean Kleissas, Kunal Lillaney, Priya Manavalan, Eric Perlman, Daniel R. Berger, Davi D. Bock, Kwanghun Chung, Logan Grosenick, Narayanan Kasthuri, Nicholas C. Weiler, Karl Deisseroth, Michael Kazhdan, Jeff Lichtman, R. Clay Reid, Stephen J. Smith, Alexander S. Szalay, Joshua T. Vogelstein, R. Jacob Vogelstein

publication / 2012
Similar Odor Discrimination Behavior in Head-Restrained and Freely Moving Mice
PLOS ONE
Neural Dynamics

Nixon M. Abraham, Delphine Guerin, Khaleel Bhaukaurally, Alan Carleton

publication / 2012
The Allen Human Brain Atlas: comprehensive gene expression mapping of the human brain
Trends in Neurosciences
Brain Science
MindScope

Elaine H. Shen, Caroline C. Overly, Allan R. Jones

publication / 2012
High-resolution gene expression atlases for adult and developing mouse brain and spinal cord
Mammalian Genome: Official Journal of the International Mammalian Genome Society
Brain Science
MindScope

Alex M. Henry, John G. Hohmann

publication / 2012
An anatomically comprehensive atlas of the adult human brain transcriptome
Nature
Brain Science
MindScope

Michael J. Hawrylycz, Ed S. Lein, Angela L. Guillozet-Bongaarts, Elaine H. Shen, Lydia Ng, Jeremy A. Miller, Louie N. van de Lagemaat, Kimberly A. Smith, Amanda Ebbert, Zackery L. Riley, Chris Abajian, Christian F. Beckmann, Amy Bernard, Darren Bertagnolli, Andrew F. Boe, Preston M. Cartagena, M. Mallar Chakravarty, Mike Chapin, Jimmy Chong, Rachel A. Dalley, Barry David Daly, Chinh Dang, Suvro Datta, Nick Dee, Tim A. Dolbeare, Vance Faber, David Feng, David R. Fowler, Jeff Goldy, Benjamin W. Gregor, Zeb Haradon, David R. Haynor, John G. Hohmann, Steve Horvath, Robert E. Howard, Andreas Jeromin, Jayson M. Jochim, Marty Kinnunen, Christopher Lau, Evan T. Lazarz, Changkyu Lee, Tracy A. Lemon, Ling Li, Yang Li, John A. Morris, Caroline C. Overly, Patrick D. Parker, Sheana E. Parry, Melissa Reding, Joshua J. Royall, Jay Schulkin, Pedro Adolfo Sequeira, Clifford R. Slaughterbeck, Simon C. Smith, Andy J. Sodt, Susan M. Sunkin, Beryl E. Swanson, Marquis P. Vawter, Derric Williams, Paul Wohnoutka, H. Ronald Zielke, Daniel H. Geschwind, Patrick R. Hof, Stephen M. Smith, Christof Koch, Seth G. N. Grant, Allan R. Jones

publication / 2012
Transcripts with in silico predicted RNA structure are enriched everywhere in the mouse brain
BMC genomics
Brain Science
MindScope

Stefan E. Seemann, Susan M. Sunkin, Michael J. Hawrylycz, Walter L. Ruzzo, Jan Gorodkin

publication / 2012
Large-scale cellular-resolution gene profiling in human neocortex reveals species-specific molecular signatures
Cell
Brain Science
MindScope

Hongkui Zeng, Elaine H. Shen, John G. Hohmann, Seung Wook Oh, Amy Bernard, Joshua J. Royall, Katie J. Glattfelder, Susan M. Sunkin, John A. Morris, Angela L. Guillozet-Bongaarts, Kimberly A. Smith, Amanda J. Ebbert, Beryl Swanson, Leonard Kuan, Damon T. Page, Caroline C. Overly, Ed S. Lein, Michael J. Hawrylycz, Patrick R. Hof, Thomas M. Hyde, Joel E. Kleinman, Allan R. Jones

publication / 2012
Adeno-associated viral vectors for anterograde axonal tracing with fluorescent proteins in nontransgenic and cre driver mice
Current Protocols in Neuroscience
Brain Science
MindScope

Julie A. Harris, Seung Wook Oh, Hongkui Zeng

publication / 2012
A toolbox of Cre-dependent optogenetic transgenic mice for light-induced activation and silencing
Nature Neuroscience
Brain Science
MindScope

Linda Madisen, Tianyi Mao, Henner Koch, Jia-min Zhuo, Antal Berenyi, Shigeyoshi Fujisawa, Yun-Wei A. Hsu, Alfredo J. Garcia, Xuan Gu, Sebastien Zanella, Jolene Kidney, Hong Gu, Yimei Mao, Bryan M. Hooks, Edward S. Boyden, György Buzsáki, Jan Marino Ramirez, Allan R. Jones, Karel Svoboda, Xue Han, Eric E. Turner, Hongkui Zeng

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