Saurabh Mogre from the Allen Institute for Cell Science is presenting a talk on Saturday, December 2, 2023 from 11:15am – 11:30am EST on Evaluating rules of intracellular organization in human induced pluripotent stem cells using generative computational models via cellPACK.

Talk Subgroup: Building the cell

Saurabh Mogre will present a poster on this topic on Sunday, December 3, 2023 from 12:15pm – 3:15pm during the Computational Cell Biology/Bioinformatics Session.

Gideon Dunster from the Allen Institute for Cell Science is presenting a talk on Saturday, December 2, 2023 at 1:15pm EST on Streamlining deep-learning based 3D segmentation and application-appropriate validation of quantitative image-based assays.

Talk Subgroup: Deep Learning and Artificial Intelligence in Cell Imaging

Gideon Dunster will also present a poster on this topic on Sunday, December 3, 2023 from 12:15pm – 3:15pm during the Computational Cell Biology/Bioinformatics session.

Thao Do from the Allen Institute for Cell Science is presenting a talk on Saturday, December 2, 2023 at 1:35pm on Accelerating Cell Biology with Scientific Illustration & User Experience Design.

Talk Subgroup: Science and Art: Bridging Two Creative Universes

Thao Do will also present a poster on this topic on Sunday, December 3, 2023 from 12:15pm – 3:15pm during the New Technologies for Cell Biology 1 session.

Susanne Rafelski from the Allen Institute for Cell Science is presenting a talk on Saturday, December 2, 2023 at 1:56pm EST on A practical approach to establishing a conceptual framework for holistic cell states and state transitions.

Talk Subgroup: MBoC Highlights: The Future of Cell Biology

Gideon Dunster from the Allen Institute for Cell Science is presenting a poster on: Streamlining deep-learning based 3D segmentation and application-appropriate validation of quantitative image-based assays.

Poster Session: Computational Cell Biology/Bioinformatics

Board/Poster Numbers: B634/P1611

Saurabh Mogre from the Allen Institute for Cell Science is presenting a poster on: Evaluating rules of intracellular organization in human induced pluripotent stem cells using generative computational models via cellPACK.

Poster Session: Computational Cell Biology/Bioinformatics

Board/Poster Numbers: B648 / P1625

Nathalie Gaudreault from the Allen Institute for Cell Science is presenting a poster on: A fully annotated, quality controlled single cell 3D image dataset of hiPSCs from the Allen Cell Collection for exploration and reuse.

Poster Session: Imaging Technologies, Single Molecule Imaging, and Super-Resolution 1

Board/Poster Numbers: B53/P1051

Jessica Yu from the Allen Institute for Cell Science is presenting a poster on: Integrating high resolution 3D live cell imaging and agent-based modeling to explore rules driving human induced pluripotent stem cell shape dynamics.

Poster Session: Computational Cell Biology/Bioinformatics

Board/Poster Numbers: B641 / P1618

Blair Lyons from the Allen Institute for Cell Science is presenting a poster on: Integrating spatial biophysical simulations across scales and methods using Simularium and Vivarium.

Poster Session: Computational Cell Biology/Bioinformatics

Board/Poster Numbers: B631/ P1608

Karthik Vegesna from the Allen Institute for Cell Science is presenting a poster on: Integrating spatial biophysical simulations across scales and methods.

Poster Session: Computational Cell Biology/Bioinformatics

Board/Poster Numbers: B632/P1609

Ritvik Vasan from the Allen Institute for Cell Science is presenting a poster on: Quantifying the morphological variability of nuclear structures using conditional variational autoencoders and appropriate data representations.

Poster Session: Computational Cell Biology/Bioinformatics

Board/Poster Numbers: B635/P1612

Suraj Mishra from the Allen Institute for Cell Science is presenting a poster on: MegaSeg: A structure agnostic deep learning model for intracellular structure segmentation in 3D fluorescence microscopy images.

Poster Session: New Technologies for Cell Biology 1

Board/Poster Numbers: B44/P1042

Thao Do from the Allen Institute for Cell Science will present a poster on Accelerating Cell Biology with Scientific Illustration & User Experience Design.

Poster Session: New Technologies for Cell Biology 1

Board/Poster Numbers: B48/P1046

Gaea Turman from the Allen Institute for Cell Science is presenting a poster on: Illuminating dynamic cellular states in hiPSCs through endogenous gene tagging.

Poster Session: Imaging Technologies, Single Molecule Imaging, and Super-Resolution 2

Board/Poster Numbers: B57/P1788

Becky Zaunbrecher from the Allen Institute for Cell Science is presenting a poster on: Re-orientation and subcellular re-organization of human induced pluripotent stem cell-derived endothelial cells in response to shear stress.

Poster Session: Blood Cells and Vessels

Board/Poster Numbers: B753 / P2461

Leigh Harris from the Allen Institute for Cell Science is presenting a poster on: Cell organization and basement membrane dynamics during the epithelial to mesenchymal transition (EMT) from 2D and 3D human induced pluripotent stem cell (hiPSC) cultures.

Poster Session: Engineering Tissues and Organs

Board/Poster Numbers: B653/P2365

Nivedita Nivedita from the Allen Institute for Cell Science is presenting a poster on: Characterizing cell states by integrating cell behavior, organization, and molecular census in migratory cells from the epithelial to mesenchymal transition (EMT) of human induced pluripotent stem cells (hiPSCs). 

Poster Session: Signaling Networks Governing Cell Migration 2

Board/Poster Numbers: B526 / P2970

Nivedita Nivedita will also present a talk on this subject on Wednesday, December 6, 2023 from 9:39am – 9:55am during the Beyond Pretty Pictures: Quantitative Methods for Learning Cell Biology from Microscopy Datasets subgroup.

Chantelle Leveille from the Allen Institute for Cell Science is presenting a poster on: Growth dynamics and size homeostasis of nuclei in growing human induced pluripotent stem cell (hiPSC) colonies.

Poster Session: Nuclear Organization: The Heart of Cellular Harmony

Board/Poster Numbers: B442/P2889

Graham Johnson, Jessica Yu, and Blair Lyons are presenting their talk on: Advancing cell biology by harnessing open-source modeling and facilitating broad community collaboration. 

Talk Subgroup: Biophysical Modeling of the Cell

Nivedita Nivedita from the Allen Institute for Cell Science is presenting a talk on Characterizing cell states by integrating cell behavior, organization, and molecular census in migratory cells from the epithelial to mesenchymal transition (EMT) of human induced pluripotent stem cells (hiPSCs). 

Talk Subgroup: Beyond Pretty Pictures: Quantitative Methods for Learning Cell Biology from Microscopy Datasets