Explore All Science Resources

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  • Video

  Allen Brain Cell (ABC) Atlas | Tutorial

  Get an overview of the Allen Brain Cell (ABC) Atlas platform, detailing the methodologies and technologies used to classify and understand the diversity of cell types in the brain.
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  Allen Mouse Brain Atlas | Tutorial

  The Allen Mouse Brain Atlas is a comprehensive, high-resolution atlas of gene expression in the adult mouse brain.
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  MapMyCells | Tutorial

  With MapMyCells, scientists can discover what cell types their transcriptomics and spatial data corresponds
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  Allen Cell Segmenter | Tutorial

  The goal of the Allen Cell Segmenter was to extract the most high-quality and biologically informative segmentations in 3d images.
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  The Allen Cell Collection | Tutorial

  The Allen Cell Collection is a complete list of all the cell lines we’ve generated. It includes quality control data, gene editing methods, SOPs for the correct use of our cells, and more.
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  Allen Human Brain Atlas | Tutorial

  Overview of the Allen Human Brain Atlas
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  Allen Brain Observatory: Two-Photon Dataset | Tutorial

  Guided walkthrough on how to work with the Visual Coding Two-Photon Dataset from the Allen Institute for Brain Science
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  Allen Brain Observatory: Neuropixels Dataset | Tutorial

  A guided walkthrough showing how to access the Neuropixels dataset
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  Common Coordinate Framework | Tutorial

  Discover how to use the Common Coordinate Framework.
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  Cell Types Database and Transcriptomic Explorer | Tutorial

  The Allen Cell Type Database and Transcriptomic Explorer presents multimodal cell type data and taxonomies related to mice and human brains.
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  MICrONS Explorer: Neuroglancer | Tutorial

  Learn how to visualize and interact with our datasets using neuroglancer.
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  MICrONS Explorer: Adding Annotations | Tutorial

  Learn how users can add annotations of different types to the dataset using an Annotation layer.
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  MICrONS Explorer: Analyzing and Visualizing Meshes | Tutorial

  Learn how to make beautiful visualizations and extract relevant shape and morphology features using 3D segmentation in mesh form.
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  MICrONS Explorer: Downloading Images and Segmentations

  In this tutorial, you’ll learn about downloading images and segmentations from the MICrONS Explorer.
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  ExA-SPIM | Scientific Overview

  A high-level explanation of the protocols necessary to implement the Expansion Selective Plane Illumination Microscopy (ExA–SPIM) pipeline
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  Setting up the WTC parental line for cardiac differentiation

  Helpful tips for setting up the WTC parental line for cardiac differentiation
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  Techniques while working with Matrigel

  Helpful tips while working with Matrigel.
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  Cryopreservation of clonal human iPS cell lines in 96-well plates

  Helpful tips on how to cryopreserve clonal human iPS cells in 96-well plates.