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Publications

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Cognition

When rules are over-ruled: Virtual bargaining as a contractualist method of moral judgment

Jun 21, 2024

Sydney Levine, Max Kleiman-Weiner, Nick Chater, Fiery Cushman, Joshua B. Tenenbaum

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Nature

Whole-cortex in situ sequencing reveals input-dependent area identity

Apr 24, 2024

Xiaoyin Chen, Stephan Fischer, Mara C. P. Rue, Aixin Zhang, Didhiti Mukherjee, Patrick O. Kanold, Jesse Gillis, Anthony M. Zador

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Cold Spring Harbor Perspectives in Biology

Reimagining Cortical Connectivity by Deconstructing Its Molecular Logic into Building Blocks

Apr 15, 2024

Xiaoyin Chen

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Cell Reports

Morpho-electric diversity of human hippocampal CA1 pyramidal neurons

Apr 11, 2024

Eline J. Mertens, Yoni Leibner, Jean Pie, Anna A. Galakhova, Femke Waleboer, Julia Meijer, Tim S. Heistek, René Wilbers, Djai Heyer, Natalia A. Goriounova, Sander Idema, Matthijs B. Verhoog, Brian E. Kalmbach, Brian R. Lee, Ryder P. Gwinn, Ed S. Lein, Eleonora Aronica, Jonathan Ting, Huibert D. Mansvelder, Idan Segev, Christiaan P. J. de Kock

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Cell Reports

Distributed X chromosome inactivation in brain circuitry is associated with X-linked disease penetrance of behavior

Apr 10, 2024

Eric R. Szelenyi, Danielle Fisenne, Joseph E. Knox, Julie A. Harris, James A. Gornet, Ramesh Palaniswamy, Yongsoo Kim, Kannan Umadevi Venkataraju, Pavel Osten

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Cell Reports

Topographical and cell type-specific connectivity of rostral and caudal forelimb corticospinal neuron populations

Mar 27, 2024

Lina Marcela Carmona, Eric D. Thomas, Kimberly Smith, Bosiljka Tasic, Rui M. Costa, Anders Nelson

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Nature Communications

Mapping human tissues with highly multiplexed RNA in situ hybridization

Mar 20, 2024

Kian Kalhor, Chien-Ju Chen, Ho Suk Lee, Matthew Cai, Mahsa Nafisi, Richard Que, Carter R. Palmer, Yixu Yuan, Yida Zhang, Xuwen Li, Jinghui Song, Amanda Knoten, Blue B. Lake, Joseph P. Gaut, C. Dirk Keene, Ed Lein, Peter V. Kharchenko, Jerold Chun, Sanjay Jain, Jian-Bing Fan, Kun Zhang

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Cell

Structurally divergent and recurrently mutated regions of primate genomes

Mar 14, 2024

Yafei Mao, William T. Harvey, David Porubsky, Katherine M. Munson, Kendra Hoekzema, Alexandra P. Lewis, Peter A. Audano, Allison Rozanski, Xiangyu Yang, Shilong Zhang, DongAhn Yoo, David S. Gordon, Tyler Fair, Xiaoxi Wei, Glennis A. Logsdon, Marina Haukness, Philip C. Dishuck, Hyeonsoo Jeong, Ricardo Del Rosario, Vanessa L. Bauer, Will T. Fattor, Gregory K. Wilkerson, Yuxiang Mao, Yongyong Shi, Qiang Sun, Qing Lu, Benedict Paten, Trygve E. Bakken, Alex A. Pollen, Guoping Feng, Sara L. Sawyer, Wesley C. Warren, Lucia Carbone, Evan E. Eichler

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PLoS computational biology

Modeling circuit mechanisms of opposing cortical responses to visual flow perturbations

Mar 01, 2024

J. Galván Fraile, Franz Scherr, José J. Ramasco, Anton Arkhipov, Wolfgang Maass, Claudio R. Mirasso

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Neuron

Behavioral strategy shapes activation of the Vip-Sst disinhibitory circuit in visual cortex

Feb 29, 2024

Alex Piet, Nick Ponvert, Douglas Ollerenshaw, Marina Garrett, Peter A. Groblewski, Shawn Olsen, Christof Koch, Anton Arkhipov

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Hippocampus

Comparison of histological delineations of medial temporal lobe cortices by four independent neuroanatomy laboratories

Feb 28, 2024

Anika Wuestefeld, Hannah Baumeister, Jenna N. Adams, Robin de Flores, Carl J. Hodgetts, Negar Mazloum-Farzaghi, Rosanna K. Olsen, Vyash Puliyadi, Tammy T. Tran, Arnold Bakker, Kelsey L. Canada, Marshall A. Dalton, Ana M. Daugherty, Renaud La Joie, Lei Wang, Madigan L. Bedard, Esther Buendia, Eunice Chung, Amanda Denning, María Del Mar Arroyo-Jiménez, Emilio Artacho-Pérula, David J. Irwin, Ranjit Ittyerah, Edward B. Lee, Sydney Lim, María Del Pilar Marcos-Rabal, Maria Mercedes Iñiguez de Onzoño Martin, Monica Munoz Lopez, Carlos de la Rosa Prieto, Theresa Schuck, Winifred Trotman, Alicia Vela, Paul Yushkevich, Katrin Amunts, Jean C. Augustinack, Song-Lin Ding, Ricardo Insausti, Olga Kedo, David Berron, Laura E. M. Wisse

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Current biology: CB

Dopamine neuron activity encodes the length of upcoming contralateral movement sequences

Feb 12, 2024

Marcelo D. Mendonça, Joaquim Alves da Silva, Ledia F. Hernandez, Ivan Castela, José Obeso, Rui M. Costa

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eLife

Rabies virus-based barcoded neuroanatomy resolved by single-cell RNA and in situ sequencing

Feb 06, 2024

Aixin Zhang, Lei Jin, Shenqin Yao, Makoto Matsuyama, Cindy T. J. van Velthoven, Heather Anne Sullivan, Na Sun, Manolis Kellis, Bosiljka Tasic, Ian Wickersham, Xiaoyin Chen

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Nature Neuroscience

Publisher Correction: Long-term labeling and imaging of synaptically connected neuronal networks in vivo using double-deletion-mutant rabies viruses

Feb 01, 2024

Lei Jin, Heather A. Sullivan, Mulangma Zhu, Thomas K. Lavin, Makoto Matsuyama, Xin Fu, Nicholas E. Lea, Ran Xu, YuanYuan Hou, Luca Rutigliani, Maxwell Pruner, Kelsey R. Babcock, Jacque Pak Kan Ip, Ming Hu, Tanya L. Daigle, Hongkui Zeng, Mriganka Sur, Guoping Feng, Ian R. Wickersham

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Nature Neuroscience

Long-term labeling and imaging of synaptically connected neuronal networks in vivo using double-deletion-mutant rabies viruses

Jan 11, 2024

Lei Jin, Heather A. Sullivan, Mulangma Zhu, Thomas K. Lavin, Makoto Matsuyama, Xin Fu, Nicholas E. Lea, Ran Xu, YuanYuan Hou, Luca Rutigliani, Maxwell Pruner, Kelsey R. Babcock, Jacque Pak Kan Ip, Ming Hu, Tanya L. Daigle, Hongkui Zeng, Mriganka Sur, Guoping Feng, Ian R. Wickersham

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Nature

Author Correction: Conserved and divergent gene regulatory programs of the mammalian neocortex

Jan 10, 2024

Nathan R. Zemke, Ethan J. Armand, Wenliang Wang, Seoyeon Lee, Jingtian Zhou, Yang Eric Li, Hanqing Liu, Wei Tian, Joseph R. Nery, Rosa G. Castanon, Anna Bartlett, Julia K. Osteen, Daofeng Li, Xiaoyu Zhuo, Vincent Xu, Lei Chang, Keyi Dong, Hannah S. Indralingam, Jonathan A. Rink, Yang Xie, Michael Miller, Fenna M. Krienen, Qiangge Zhang, Naz Taskin, Jonathan Ting, Guoping Feng, Steven A. McCarroll, Edward M. Callaway, Ting Wang, Ed S. Lein, M. Margarita Behrens, Joseph R. Ecker, Bing Ren

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Nature Neuroscience

Backward masking in mice requires visual cortex

Jan 01, 2024

Samuel D. Gale, Chelsea Strawder, Corbett Bennett, Stefan Mihalas, Christof Koch, Shawn R. Olsen

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