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impact
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team science
our story
explore our impact
careers and opportunities
join us
open science
sharing science to speed discovery
open science week
celebrating open science
team science
people & teams
discovery is a team effort
allenites
the people who make our work possible
advisors
their input shapes our science
board of directors
they help us fulfill our mission
shanahan foundation fellowship
at the interface of data and neuroscience
next generation leaders
fostering emerging leaders in bioscience
research
back to menu
overview
our approach
science at the scale of greatest impact
publications
explore our publications
open science
sharing science to speed discovery
science accelerators
brain science
building a blueprint of the brain
cell science
understanding how cells become organs
neural dynamics
revealing the brain’s hidden algorithms
immunology
creating the ultimate immune system reference
synthetic biology
seattle hub for synthetic biology
education
back to menu
overview
science education
science is for everyone
open science
sharing science speeds discovery
engagement
education resources
real science. real skills.
field trips
experience science where it happens
educator development
empowering educators
news
back to menu
overview
all news
explore the latest news
podcast
the human stories behind discovery
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stay connected to our science
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overview
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conferences
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allencell.org
allenimmunology.org
allenneuraldynamics.org
brain-bican.org
brain-map.org
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Sven Dorkenwald
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featured contributions
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featured stories
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Serendipity and Synapses: How a part-time job unlocked a passion for brain-mapping
For Sven Dorkenwald, Ph.D., mapping the brain's connections was more than a job; it became a passion sparked by a simple twist of fate.
featured media
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featured publications
publication
/
2025
The synaptic architecture of layer 5 thick tufted excitatory neurons in mouse visual cortex
Nature Neuroscience
publication
/
2025
An unsupervised map of excitatory neuron dendritic morphology in the mouse visual cortex
Nature Communications
publication
/
2025
CAVE: Connectome Annotation Versioning Engine
Nature Methods
publication
/
2025
NEURD offers automated proofreading and feature extraction for connectomics
Nature
publication
/
2025
Inhibitory specificity from a connectomic census of mouse visual cortex
Nature
publication
/
2025
Functional connectomics reveals general wiring rule in mouse visual cortex
Nature
publication
/
2025
Perisomatic ultrastructure efficiently classifies cells in mouse cortex
Nature
publication
/
2024
Whole-brain annotation and multi-connectome cell typing of Drosophila
Nature
publication
/
2024
The fly connectome reveals a path to the effectome
Nature
publication
/
2024
Network statistics of the whole-brain connectome of Drosophila
Nature
publication
/
2024
Neuronal wiring diagram of an adult brain
Nature
publication
/
2023
Multi-layered maps of neuropil with segmentation-guided contrastive learning
Nature Methods
publication
/
2022
Oligodendrocyte precursor cells ingest axons in the mouse neocortex
Proceedings of the National Academy of Sciences of the United States of America
publication
/
2022
Binary and analog variation of synapses between cortical pyramidal neurons
eLife
publication
/
2022
Reconstruction of neocortex: Organelles, compartments, cells, circuits, and activity
Cell
publication
/
2022
FlyWire: online community for whole-brain connectomics
Nature Methods
publication
/
2021
Structure and function of axo-axonic inhibition
eLife
publication
Connectomics of predicted Sst transcriptomic types in mouse visual cortex
Nature
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brain science
Mapping every cell, connection, and circuit in the brain—openly shared with the world.
cell science
Decoding how cells become tissues, then programming that knowledge into powerful new research tools.
neural dynamics
Revealing the brain's hidden algorithms that transform neural activity into real-world behavior.
immunology
Creating the deepest open reference for the healthy human immune system ever built.
synthetic biology
Engineering cells to record their own histories, transforming how we understand disease over time.
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Big questions, open answers, and science built to be shared.
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Inspiring the next generation of scientists through open science resources.
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Our science is empowering researchers and advancing health worldwide.
