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people

Lucas T. Graybuck

Investigator, Assistant

teams /
Allenite

Lucas T. Graybuck (also published as Lucas T. Gray) currently works as a senior scientist on the Molecular Biology team in the Allen Institute for Immunology. He contributes to projects related to single-cell genomics to establish links between epigenetics, transcriptomics, and cell function.

Lucas joined the Allen Institute in 2014 to work in the Mouse Cell Types program. He was instrumental in projects related to cell type identification, labeling, and epigenetic perturbation for the Mouse Cell Types, Human Genetic Tools, and Epigenetic Control in Transgenic Mice projects.

Before joining the Allen Institute, he worked as a Postdoctoral Fellow in the lab of Dr. Nancy Maizels at the University of Washington. In this position, he studied the roles of G-quadruplex (G4) DNA structures in human gene transcription, and the consequences of disordered expression of G4-unwinding DNA helicases BLM and WRN. His work also explored the genomic binding patterns of general transcription factor TFIIH helicases XPB and XPD, which also interact with G4 DNA.

He earned his Ph.D. in Biochemistry in the lab of Dr. Alan Weiner at the University of Washington where he studied the domesticated piggyBac transposase fusion protein CSB-PGBD3. CSB-PGBD3 is found only in the genomes of simian primates, and appears to be conserved as a transcription factor. His work in the Weiner lab also included transcriptomic analysis of gene expression in cell lines from patients with Cockayne Syndrome, a genetic disorder with both neurodevelopmental and progeria-like symptoms, and conservation analysis of the neural-specific domesticated transposase PGBD5.

Expertise

  • Transcriptomics
  • Chromatin accessibility
  • Genomics
  • Data visualization

Research Programs

  • Molecular Biology
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New technique explores the ins and outs of our immune cells
Method that captures 3 different characteristics of individual human cells at once can shed light on aging and disease.

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featured publications

publication / 2021
Single-cell and single-nucleus RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates, and humans
eLife
publication / 2021
A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation
Cell
publication / 2021
Enhancer viruses for combinatorial cell-subclass-specific labeling
Neuron
publication / 2021
Simultaneous trimodal single-cell measurement of transcripts, epitopes, and chromatin accessibility using TEA-seq
eLife
publication
BarWare: efficient software tools for barcoded single-cell genomics
publication
A comprehensive platform for analyzing longitudinal multi-omics data
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