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education

Sleepy mice case study

Read about how undergraduate educators used open neuroscience data to create an in-class case study

resource type / 
Publication
topic / 
neuroscience
published / February 13, 2026
audience / 
Undergraduate
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About this resource:  

Educators from the University of North Carolina Chapel Hill and Crown College used the open data from the Allen Institute to develop a teaching tool for courses in neuroscience, biopsychology, and human anatomy and physiology. These educators detailed their process in the article titled Sleepy Mice Case Study: Implementation and Assessment, which was published in the Journal of Undergraduate Neuroscience Education (JUNE) in 2023.  

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About the article:

Article: Sleepy Mice Case Study: Implementation and Assessment  

Authors: Monica M. Gaudier-Diaz, Shveta V. Parekh, Rachel E. Penton, Sabrina D. Robertson & Aeisha Thomas

Abstract: Case studies are a valuable teaching tool to engage students in course content using real-world scenarios. As part of the High-throughput Discovery Science & Inquiry based Case Studies for Today’s Students (HITS) Research Coordination Network (RCN), our team has created the Sleepy Mice Case Study for students to engage with RStudio and the Allen Institute for Brain Science’s open access high-throughput sleep dataset on mice. Sleep is important for health, a familiar concern to college students, and was a basis for this case study. In this case, students completed an initial homework assignment, in-class work, and a final take-home application assignment. The case study was implemented in synchronous and asynchronous Introductory Neuroscience courses, a Biopsychology course, and a Human Anatomy and Physiology course, reflecting its versatility. The case can be used to teach course-specific learning objectives such as sleep-related content and/or science data processing skills. The case study was successful as shown by gains in student scores and confidence in achieving learning objectives. Most students reported enjoying learning about sleep deprivation course content using the case study. Best practices based on instructor experiences in implementation are also included to facilitate future use so that the Sleepy Mice Case Study can be used to teach content and/or research related skills in various courses and modalities.  

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