2020 Neuropixels Workshop

2021 Neuropixels Workshop Attendee Information

Workshop information

Thank you for joining us at the Allen Institute Neuropixels Workshop. All workshop information will be posted on this page as it becomes available.

If you have questions or technical difficulties, please contact events@alleninstitute.org.

Joining the workshop online

Join workshop on Zoom

Alternatively, enter the meeting ID 928 1891 6300 directly into Zoom. You will be prompted to enter the meeting passcode: 486063. You will use the same link to join both days of the workshop.

We strongly recommend installing the Zoom desktop client or app. If you will be joining through a browser, please note meeting audio may not work with browsers other than Chrome. The Zoom link will be the same for both days of the event.

If you have previously installed the Zoom desktop client, be sure that you are using version 5.4 or higher by checking Settings > About Zoom (see full instructions). You may not be automatically prompted to update Zoom; please manually check for updates before the workshop begins. The Allen Institute Events Team will open the Zoom meeting 15 minutes early for troubleshooting. Please plan to log in early to test your camera and microphone and get familiar with the virtual meeting environment.

Workshop agenda

Agenda is subject to change.

Thursday, January 14, 2021

Session

Speakers

Time: Eastern

Time: Pacific

Zoom meeting opens to participants

 

10:30am

7:30am

Meeting introduction

All attendees

11:00-11:45am

8:00-8:45am

Workshop overview and introduction to Neuropixels

Josh Siegle

11:45am-12:15pm

8:45-9:15am

Recording across the brain

Nick Steinmetz

12:15-12:45pm

9:15-9:45am

Break

 

12:45-1:00pm

9:45-10:00am

Overview of Neuropixels pipeline methods

Severine Durand

1:00-1:30pm

10:00-10:30am

Surgery demonstration

Tamina Ramirez

1:30-2:00pm

10:30-11:00am

Break

 

2:00-2:15pm

11:00-11:15am

Neuropixels hardware

Josh Siegle

2:15-2:30pm

11:15-11:30am

Calibration/targeting demonstration

Gregg Heller

2:30-2:45pm

11:30-11:45am

Break

 

2:45-3:00pm

11:45am-12:00pm

Probe insertion demonstration

Neuropixels operations team

3:00-3:30pm

12:00-12:30pm

Q&A

All speakers

3:30-4:00pm

12:30-1:00pm

 

Friday, January 15, 2021

Session

Speakers

Time: Eastern

Time: Pacific

Zoom meeting opens to participants

 

10:30am

7:30am

Chronic Neuropixels methods

Cagatay Aydin

11:00-11:30am

8:00-8:30am

Open Ephys demonstration

Pavel Kulik and Anjal Doshi

11:30am-12:00pm

8:30-9:00am

Break

 

12:00-12:15pm

9:00-9:15am

Spike sorting with Kilosort

Nick Steinmetz

12:15-12:45pm

9:15-9:45am

Phy curation and quality metrics

Gregg Heller

12:45-1:15pm

9:45-10:15am

Break

 

1:15-1:30pm

10:15-10:30am

Large-scale data analysis

Xiaoxuan Jia

1:30-2:00pm

10:30-11:00am

AllenSDK and NWB files

Josh Siegle

2:00-2:30pm

11:00-11:30am

Break

 

2:30-3:00pm

11:30am-12:00pm

CCF registration demo

Neuropixels operations team

3:00-3:30pm

12:00-12:30pm

Q&A

All speakers

3:30-4:00pm

12:30-1:00pm

 

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