Staff Profiles

Katie Glattfelder

Senior Project Coordinator

Katie Glattfelder joined the Allen Institute in 2004 to section tissue used for the in situ hybridization (ISH) images for Allen Mouse Brain Reference Atlas.  In 2006, she moved to the newly formed Annotation group where she led the group's efforts to manually analyze ISH images for the Allen Spinal Cord Atlas and Allen Developing Mouse Brain Atlas, assisted in creating the seven Allen Developing Mouse Brain Atlases, and led teams of interns and Research Associates in manual reconstruction of neurons in large scale serially sectioned electron microscopy images in mouse primary visual cortex.  Katie moved to the scientific program management team in early 2016 where she currently supports scientists on a variety of projects and large grants.  Prior to joining the Institute, she worked in a GLP certified contract research organization on pharmacokinetic and toxicokinetic studies in mouse and non-human primate models.  Katie studied psychology at Calvin College in Grand Rapids, MI with an emphasis in life sciences. 

Selected Publications

Anatomy and function of an excitatory network in the visual cortex

March 28, 2016

Lee WA, Bonin V, Reed M, Graham BJ, Hood G, Glattfelder K, Reid RC

A High-Resolution Spatiotemporal Atlas of Gene Expression of the Developing Mouse Brain

June 17, 2014

Thompson CL, Ng L, Menon V, Martinez S, Lee CK, Glattfelder K, Sunkin SM, Henry A, Lau C, Dang C, Garcia-Lopez R, Martinez-Ferre A, Pombero A, Rubenstein JL, Wakeman WB, Hohmann J, Dee N, Sodt AJ, Young R, Smith K, Nguyen TN, Kidney J, Kuan L, Jeromin A, Kaykas A, Miller J, Page D, Orta G, Bernard A, Riley Z, Smith S, Wohnoutka P, Hawrylycz MJ, Puelles L, Jones AR

Large-scale cellular-resolution gene profiling in human neocortex reveals species-specific molecular signatures

April 13, 2012

Zeng H, Shen EH, Hohmann JG, Oh SW, Bernard A, Royall JJ, Glattfelder KJ, Sunkin SM, Morris JA, Guillozet-Bongaarts AL, Smith KA, Ebbert AJ, Swanson B, Kuan L, Page DT, Overly CC, Lein ES, Hawrylycz MJ, Hof PR, Hyde TM, Kleinman JE, Jones AR

Adult spinal cord radial glia display a unique progenitor phenotype

September 12, 2011

Petit A, Sanders AD, Kennedy TE, Tetzlaff W, Glattfelder KJ, Dalley RA, Puchalski RB, Jones AR, Roskams AJ

Divergent and nonuniform gene expression patterns in mouse brain

November 2, 2010

Morris JA, Royall JJ, Bertagnolli D, Boe AF, Burnell JJ, Byrnes EJ, Copeland C, Desta T, Fischer S, Goldy J, Glattfelder KJ, Kidney JM, Lemon T, Orta GJ, Parry SE, Pathak SD, Pearson OC, Reding M, Shapouri S, Smith KA, Soden C, Solan BM, Weller J, Takahashi JS, Overly CC, Lein ES, Hawrylycz MJ, Hohmann JG, Jones AR

Genome-wide atlas of gene expression in the adult mouse brain

January 11, 2007

Lein ES, Hawrylycz MJ, Ao N, Ayres M, Bensinger A, Bernard A, Boe AF, Boguski MS, Brockway KS, Byrnes EJ, Chen L, Chen L, Chen TM, Chin MC, Chong J, Crook BE, Czaplinska A, Dang CN, Datta S, Dee NR, Desaki AL, Desta T, Diep E, Dolbeare TA, Donelan MJ, Dong HW, Dougherty JG, Duncan BJ, Ebbert AJ, Eichele G, Estin LK, Faber C, Facer BA, Fields R, Fischer SR, Fliss TP, Frensley C, Gates SN, Glattfelder KJ, Halverson KR, Hart MR, Hohmann JG, Howell MP, Jeung DP, Johnson RA, Karr PT, Kawal R, Kidney JM, Knapik RH, Kuan CL, Lake JH, Laramee AR, Larsen KD, Lau C, Lemon TA, Liang AJ, Liu Y, Luong LT, Michaels J, Morgan JJ, Morgan RJ, Mortrud MT, Mosqueda NF, Ng LL, Ng R, Orta GJ, Overly CC, Pak TH, Parry SE, Pathak SD, Pearson OC, Puchalski RB, Riley ZL, Rockett HR, Rowland SA, Royall JJ, Ruiz MJ, Sarno NR, Schaffnit K, Shapovalova NV, Sivisay T, Slaughterbeck CR, Smith SC, Smith KA, Smith BI, Sodt AJ, Stewart NN, Stumpf KR, Sunkin SM, Sutram M, Tam A, Teemer CD, Thaller C, Thompson CL, Varnam LR, Visel A, Whitlock RM, Wohnoutka PE, Wolkey CK, Wong VY, Wood M, Yaylaoglu MB, Young RC, Youngstrom BL, Yuan XF, Zhang B, Zwingman TA, Jones AR